PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0146s0025.4.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 389aa    MW: 42016.7 Da    PI: 6.6433
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0146s0025.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.92e-22251313163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          e++lk errkq+NRe+ArrsR+RK+ae+eeL+ kv++L aeN++Lk+e+++l k+++klk e+
  Kalax.0146s0025.4.p 251 ERQLKQERRKQSNRESARRSRLRKQAETEELAAKVDVLMAENMTLKSEINQLIKNSEKLKFEN 313
                          799********************************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.9E-27192IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1701.6E-15249311No hitNo description
SMARTSM003389.9E-19251315IPR004827Basic-leucine zipper domain
PfamPF001701.9E-20251313IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.449253316IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-11254310No hitNo description
CDDcd147022.29E-19256302No hitNo description
PROSITE patternPS000360258273IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MGNNEESKSL KPDTTPLDQN GIHVYPPPDW AAMQAFYGPR IPLPQYYNSA YPAGHPPHPY  60
MWGPPQAMMP PFSAPYAAIY PQGGVYAHPG VPLGSPKPGF GAPSTPSTTE ASMMQAATAL  120
TIQIPGKTSG NTTGGSRDSE SGDSGGSSGG SREKTSADEQ SHRKRKCEQS VDIEKTVKIE  180
IQANSIVPVD TNRESSKVAG IAVGPAANGK LENVTVLDLD MKPNHIVNSK MSFDAQQSGS  240
KLSSEACFQS ERQLKQERRK QSNRESARRS RLRKQAETEE LAAKVDVLMA ENMTLKSEIN  300
QLIKNSEKLK FENARMMTEE TERIGFNNAD DSRSQTLSTE NLLSRVNNSG SVVTPEEEGE  360
MHGNNNSNPT KLRQLLDASP RADAVAAS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1267273RRSRLRK
2267274RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021613119.11e-109common plant regulatory factor 1-like isoform X2
TrEMBLA0A2P5E8F91e-110A0A2P5E8F9_TREOI; Basic-leucine zipper transcription factor
STRINGcassava4.1_008459m1e-109(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.22e-39G-box binding factor 3