PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0150s0052.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 282aa MW: 31656.8 Da PI: 8.5509

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0150s0052.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116.4	1.1e-36	54	113	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+++cprC s++tkfCy+nny+++qPryfC++C+ yWt GG++rn+PvG+grrk+k+s Kalax.0150s0052.1.p 54 PDKIIPCPRCASMDTKFCYFNNYNVNQPRYFCRKCQMYWTSGGTMRNLPVGAGRRKSKSS 113 7899*****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-27	42	111	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.8E-30	56	112	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	26.748	58	112	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence Send to blast
MWESPTPSIL SGESSCNLLD WQRSSGGVSS CGDWGTNEEQ KSDAARQDKT LKKPDKIIPC 60 PRCASMDTKF CYFNNYNVNQ PRYFCRKCQM YWTSGGTMRN LPVGAGRRKS KSSAPQHQQM 120 EVPFQPHMML FPAPLWPPFP WNPAQYNYPL PSQINYRAGF PGPFYPMYTG CATPRSWNAP 180 LSVHPSPPSL ESEPKSPTLG KHLRDDIDNA TRPGNIDTGE WQIEENLKPP IWVAKTVRID 240 NPAEAAKNSM WVTLGIKNDN IVLSNGKGHF NLFSSLETER S*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015582505.1	3e-67	cyclic dof factor 2 isoform X3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62430.1	2e-42	cycling DOF factor 1

Link Out ? help Back to Top
Phytozome	Kalax.0150s0052.1.p