PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0155s0050.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 435aa    MW: 46956.4 Da    PI: 9.4205
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0155s0050.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.74.3e-05204226223
                          EETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                           Cp Cg++F+  ++L++H+ + H
  Kalax.0155s0050.1.p 204 ACPQCGEVFPKIESLEHHQAVrH 226
                          6******************9888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280203226IPR007087Zinc finger, C2H2
PROSITE profilePS501578.808203231IPR007087Zinc finger, C2H2
SuperFamilySSF563996.14E-23228432No hitNo description
Gene3DG3DSA:3.90.228.105.9E-14230432IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MISLLSSNEA CSFIIFTFSE LHSPHLLALF FFMALFTFQQ PAPKPNTNKK KWEKEKQNQQ  60
QPPLSSSWHQ IKNLLHCKQT QVILPASGPA KAPVEKQSGS SKNNGSSNYS YKSICRFGDV  120
VHGNTRVGHR ADNSPEGGSA GKESGPKKIN GSARRVVGSG SVRSVGGGSC GPSGLQFRKL  180
SGCYECHTVV DPSRYPVPRR TVCACPQCGE VFPKIESLEH HQAVRHAVSE LGPEDSGRNI  240
VEIIFKSSWL KKDKPICKIE RILKVHNTNR TIQRFEDCRD AIKLRASASA KKNPRCAADG  300
NELLRFHCTT LSCALGSRNS SSLCAAIPGC NICTLIRHGF RPSDGGGGVF TAAGSGRAHD  360
GVEGKEERRA MIVCRVVAGR VRREGAGEPE EGGGGSGFDS VAGRAGSYSD LEELTVFNPR  420
AILPCFVVIY KSTE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104443.11e-166uncharacterized protein LOC21399114
RefseqXP_018833374.11e-166PREDICTED: uncharacterized protein LOC109000816
TrEMBLA0A2P5F7Z41e-167A0A2P5F7Z4_TREOI; Zinc finger, C2H2 domain containing protein
STRINGXP_010104443.11e-165(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.11e-116C2H2-like zinc finger protein