PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0158s0023.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 193aa MW: 21576.4 Da PI: 6.5265

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0158s0023.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	95.9	7.8e-30	54	123	9	78
TCP 9 skihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...ssssaseceaess 78 ++h kv gRdRRvR++ eca +F+L++ LG+++d++ti WLl+q+++ai ++tg+ s++++ ++s+ Kalax.0158s0023.1.p 54 PDRHKKVIGRDRRVRMPPECAEMVFQLTRDLGHKSDGETIKWLLKQSEAAIRAATGSgiaSTDPS---VTNSK 123 59*******************************************************55533333...11111 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51369	20.567	53	107	IPR017887	Transcription factor TCP subgroup
Pfam	PF03634	1.1E-25	55	149	IPR005333	Transcription factor, TCP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence Send to blast
MESWEKRFAG ELERQLEQDQ VNEKEAVAEN PVLPKTTKMV SGKKDHPRRR SNIPDRHKKV 60 IGRDRRVRMP PECAEMVFQL TRDLGHKSDG ETIKWLLKQS EAAIRAATGS GIASTDPSVT 120 NSKTISDSSV VPCLIQPSAV VDLPQIQPPL EPPVTLPPEQ QEKKDQGTSY SNSFWLDVAN 180 MDLEQLGRDH FP*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	1e-25	TCP family protein

Link Out ? help Back to Top
Phytozome	Kalax.0158s0023.1.p