PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0161s0040.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 294aa    MW: 32636.8 Da    PI: 4.7597
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0161s0040.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1331.3e-10122166246
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                          +++k+ +r  +NR AA rsR+RKk++++ Le k+  Le+e ++L 
  Kalax.0161s0040.1.p 122 PDSKKRKRQLRNRDAALRSRERKKMYVKDLELKSRYLEGECRRLG 166
                          689*************************************98664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-12120183No hitNo description
SMARTSM003382.7E-6121185IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.875123165IPR004827Basic-leucine zipper domain
PfamPF001701.3E-8124167IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-10125181No hitNo description
CDDcd147041.09E-14126177No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MSDAGVFDDG FDPELMKLLE DSLSPPEEAS TESAPSWFGE IENMLMNDDA EIDGQLEDDV  60
DPSYVDQFMS DVLLDVPADV AVDGDLLSPS DGKSNQSDLS NFNGGSENET EAAHADANGD  120
DPDSKKRKRQ LRNRDAALRS RERKKMYVKD LELKSRYLEG ECRRLGRLLQ CCYAENQDLR  180
FRLHMGNGAA GAAMTKQESA VLLLESLLLG SLFWFLGITC LFHQPKLLRT NKEGVALRRI  240
GVNDPKSVQL RRAGNNIIQC LRLGTLVDSR RCRAWRTKMK PLYGYTAAVG ILA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125144KRKRQLRNRDAALRSRERKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018832980.12e-62PREDICTED: bZIP transcription factor 60-like
TrEMBLA0A2I4FMW65e-61A0A2I4FMW6_JUGRE; bZIP transcription factor 60-like
STRINGXP_010061241.15e-58(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.14e-13basic region/leucine zipper motif 60