PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0172s0077.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 230aa    MW: 26061.2 Da    PI: 9.1162
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0172s0077.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.17.7e-1792139354
                  AP2   3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                          ykGVr++k +g+++AeIrd +     r +r++lg+f+taeeAa a+ +   +++
  Kalax.0172s0077.2.p  92 YKGVRRRK-WGKFAAEIRDpF-----RkTRVWLGTFDTAEEAADAYRRKEIEYK 139
                          9****998.**********77.....45******************99888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.43991149IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-1791140IPR016177DNA-binding domain
SMARTSM003804.4E-1591140IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-2191137IPR001471AP2/ERF domain
CDDcd000182.24E-2092131No hitNo description
PfamPF008475.3E-1192137IPR001471AP2/ERF domain
PRINTSPR003673.0E-1092103IPR001471AP2/ERF domain
PRINTSPR003673.0E-10114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MRSPRRDMDG FESVQKVRIF CNDPYATESD SSSDEEDHLV GDRTRPGKRY VQEILIRGDG  60
KSERNKQNEI VQRSGGFRLA ESSRKGKSST MYKGVRRRKW GKFAAEIRDP FRKTRVWLGT  120
FDTAEEAADA YRRKEIEYKK LVAEKRSLLV KTCSAFVTPP GPSSSDDTAD FCSLHSPSSV  180
LDVTGAAGRQ DRRSTGPDHR VKEESSFMME EEVLISTFLK EPIFSAELSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19298KGVRRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61630.15e-24cytokinin response factor 6