PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0188s0043.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 305aa    MW: 32940.2 Da    PI: 10.1184
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0188s0043.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix53.27.8e-1727109186
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          +W +  v  L+ea++ ++   +r+klk+++W+ev++++ +     ++++qCk+k+e+++kry+  ++   +    s st+p++++++
  Kalax.0188s0043.2.p  27 EWGEGAVASLLEAYEAKWVLRNRAKLKGHDWQEVARFVsATADAPKTQTQCKNKIESMKKRYRSAAAATAG----SASTWPFYQRIH 109
                          5*************************************5555679*******************9999997....4779*****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.8E-2025110No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MEKATANHEL PPKPPPCGGG DKLKRDEWGE GAVASLLEAY EAKWVLRNRA KLKGHDWQEV  60
ARFVSATADA PKTQTQCKNK IESMKKRYRS AAAATAGSAS TWPFYQRIHN LLRGDNNNTG  120
GGGSSRAAPQ ISSSPLEAPS PPPFPATAQE SNGLVFKAAE EAEDDAGAKL LLSQPDGAHD  180
KALTHPNSTD SVSTTPAFYR DGGKLIRPSS SNARRKRKSG VLVAESVRWL AEAVVRTEKA  240
RMETMRELEK MRIEAEMKRG ELELKRTRII ADTQLQIARL LSGSCVLVPK TADGSPPSFQ  300
PGTS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027342812.12e-81trihelix transcription factor ASIL1-like
TrEMBLA0A1S3TYH29e-77A0A1S3TYH2_VIGRR; trihelix transcription factor ASIL2
TrEMBLA0A371E9U65e-77A0A371E9U6_MUCPR; Trihelix transcription factor ASIL2 (Fragment)
STRINGGLYMA13G26550.12e-76(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.12e-36sequence-specific DNA binding transcription factors