PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0191s0005.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 428aa    MW: 46671.9 Da    PI: 6.6104
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0191s0005.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.2e-10274322355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  Kalax.0191s0005.2.p 274 NSHSLAERVRREKISERMKLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 322
                          58**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.01E-11269326No hitNo description
SuperFamilySSF474595.1E-17269339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.586271321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.5E-17272338IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-7274322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-10277327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MGVAGVAGDG EVDLGFHQNS NKGFMSCSTS GMNTNPVPNK AAGTAMSSIP MFKSSAGSDP  60
FFGTHWDPLL AINHSENFGG GSSMVSHCGY ANPPYPIHNQ GMSSTHLVQY PSSDSTLVDL  120
PKIQHFGSGN FSDMAGLYGL PALGATGTSS CYQNYLPNQE VVTHRHHNTD GARSQDDCQV  180
SEERALEASP NGKRRRRSIE SASELNSNKV TEGEQQKDMS EGSFDQPGEP DDKKQSQILK  240
NKQSSKQAKK NSPTEDNNKD TYIHVRARRG QATNSHSLAE RVRREKISER MKLLQELVPG  300
CNKITGKAVM LDEIINYVQS LQQQVEFLSM KLATVNPELD IDIERMLSKD ILQSRGDNTV  360
MLGISPGIRN SHPYPHAMLQ SGMQNSATEY HHMPQNGWNN ELQSLLQMGF CSNPAVDNQG  420
LDGCSKP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021828015.11e-156transcription factor bHLH74 isoform X2
TrEMBLA0A251RBG41e-153A0A251RBG4_PRUPE; Uncharacterized protein
STRINGXP_008220406.11e-153(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.16e-75bHLH family protein