PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0201s0060.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family FAR1
Protein Properties Length: 183aa    MW: 20847.9 Da    PI: 10.4525
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0201s0060.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.32.4e-132633490
                 FAR1 34 vCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                         +C+++g++ +++ +     ++   r+ra+trtgC+a+++ k+ +++ ++v+++ +eHnH+l+
  Kalax.0201s0060.1.p  2 YCNRQGFNISKHYDslageSSAGFRRRASTRTGCRARVVFKNVTNSAYVVKEFIEEHNHQLT 63
                         7*******99999999988888889***********************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.9E-11263IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MYCNRQGFNI SKHYDSLAGE SSAGFRRRAS TRTGCRARVV FKNVTNSAYV VKEFIEEHNH  60
QLTAPEYHQF LKSNSLIKCV GCDNQLIKDL LDVIRNFKSQ KLPETTHMSK TDLFEKLIGS  120
PRPSEIVVQP PQQAKNKGSG KRLKSDRGKI TEQAKRHPRK CRVCNQMVNH DSRNCPDKKN  180
KC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.25e-08FAR1 family protein