PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0229s0034.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 448aa    MW: 49705.6 Da    PI: 4.9634
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0229s0034.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.10.000182733041855
                          HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH  18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          ++f++Lr+++P+a   +    +Ka++Le+++ ++++L+
  Kalax.0229s0034.2.p 273 ERFSTLRSMIPSA---G---ADKASVLEETIMHVQKLE 304
                          68**********9...4...8999**********9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000830.00221268307No hitNo description
Gene3DG3DSA:4.10.280.101.5E-5273318IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-5273322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MELGTTELVL EDPALIQRVK TSLLEFSKPG YNVNWTFGPY STDSDEDPVC VDAKMNTLQN  60
VQLGAENIKA EDEEMRLDGH SEDSDEELGA GLPDCSSDTS GGNHQSHVYS WHLTDGYFGA  120
DFLGFTNSSD CASQVVESPA DTKISEPRSG SPNAPNCLQE NNCIKPDAQD NGSSDELHYR  180
KVISTILRKS NQLTGSLGCS ASGYACRSGF RAWKNRGAAT SRRLLDRQRI LKKTLFTIPL  240
MYSKGFIKPE TEQIGKKAGD KPNDGMSRIL EHERFSTLRS MIPSAGADKA SVLEETIMHV  300
QKLEARLGEL ESSVGNTRQD PNWEPSRVPR DDTAEQVSDN SESERKILKQ KRKVYECESA  360
SEVNSSLKVV IMEQEVSIEV TCRCREYLLL DIMDAVNRLQ LDAHLVHSAT HEELFTLKLK  420
SKFRGTGVVP SGRVVKQMIW ESICEEV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63650.36e-38bHLH family protein