PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0262s0061.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 211aa MW: 24538.4 Da PI: 9.9248

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0262s0061.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.2	2.8e-11	90	135	4	49
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +++ +r+ +NRe+ArrsR RK++ +++L++ v L N++L ++l Kalax.0262s0061.1.p 90 DRKVKRMKSNRESARRSRMRKQQHLDNLRNQVNRLNLTNRELSDRL 135 6889*************************************99776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.2E-11	87	151	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.829	89	135	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.5E-10	89	135	No hit	No description
SuperFamily	SSF57959	5.27E-10	91	137	No hit	No description
Pfam	PF00170	2.7E-8	91	135	IPR004827	Basic-leucine zipper domain
CDD	cd14702	3.14E-16	92	139	No hit	No description
PROSITE pattern	PS00036	0	94	109	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence Send to blast
MLSAAAPARS ESQADPKFGF SDSEFDSWDF YFHDLVFEPE PICSNPMSTE SNQNSPNSIE 60 LNQGSRVSPE SNQIWFKPVE PTNEPGALDD RKVKRMKSNR ESARRSRMRK QQHLDNLRNQ 120 VNRLNLTNRE LSDRLRFVLF NGKIVRSENQ RLRTEHTLLR HRLIQLQNLM IFRGVQRMNN 180 HNNNTISSNY FDNLGGYEQT MINEPTRLIA *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	103	110	RRSRMRKQ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22850.2	2e-23	basic leucine-zipper 6

Link Out ? help Back to Top
Phytozome	Kalax.0262s0061.1.p