PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0265s0021.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 329aa    MW: 36658.5 Da    PI: 7.5381
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0265s0021.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.66e-15156202455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           h ++Er+RR+++N++f+ L + +P +     kK++Ka++L++A++Y+k+Lq
  Kalax.0265s0021.1.p 156 DHIMAERNRREKLNQRFNALSSAIPGL-----KKMDKATVLQEATKYVKQLQ 202
                          699************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.132152201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-12156202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-18156215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.58E-14157206No hitNo description
SuperFamilySSF474591.22E-17157216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-15158207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
EMDQHQNLSN LWMVNSQADM SGAIPMEAAF DDLQHSNSLY AYQLPIVETA MNDFQINNNP  60
MEQLTTNIRG SYDVSTTSDS DAADAAIYLY SSVNPTGVAW PKQENHCYNN NCPSQFTNGD  120
YPVWNENYSW TPGREVKGKA TNAIGATTSR SSEAQDHIMA ERNRREKLNQ RFNALSSAIP  180
GLKKMDKATV LQEATKYVKQ LQERIKTLEK QTKSITMMES AVFVKKSLLV INDINKSGFS  240
NETSFNEKTL SDESLPVIKV RFCEKKVLIR VHCDRKKGAS AEKILGEIAK LHLTVVNSNV  300
LAFGSSALDV TVLAKPKDLL RVIYALFS*
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ9T0724e-46BH025_ARATH; Transcription factor bHLH25
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-48bHLH family protein