PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0265s0023.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 316aa    MW: 35384 Da    PI: 6.3691
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0265s0023.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.43e-14131177455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           h ++Er+RR+++N++f  L +++P +     kK++Ka++Le A++Y+k+Lq
  Kalax.0265s0023.1.p 131 DHIMAERNRREKLNQRFIALSSVIPGL-----KKMDKATVLEDATKYVKQLQ 177
                          599************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.91127176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-17131188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.4E-12132177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.26E-17132189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.17E-14132181No hitNo description
SMARTSM003533.5E-16133182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MEAAFDDLQH SNSLYAYQLP TVETAMNDFQ INNNPMEQFT TNTRGSYDIS TTSYSDAADA  60
AIYLYSSVNP TGVAWPEQEN HCYNNNCPSQ FTNGDYPVWN ENYASTPGRE VKGKATNAIG  120
ATASRSSEVQ DHIMAERNRR EKLNQRFIAL SSVIPGLKKM DKATVLEDAT KYVKQLQEQI  180
KTLQKQTKSR TMIESAFVVK KTLLVINDDN NMSGFFNETS FIERTLPDES LPEIEVRFCD  240
KKVLVRVHCD SRKKGAAEKI LSEIMKLHLT VVNSNILALG SLALDVTVLA QRNQECSMAE  300
KELVKTLCRA LKSII*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.14e-51bHLH family protein