PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0286s0037.2.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 778aa MW: 85449.9 Da PI: 6.1675

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0286s0037.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.9	0.0014	622	644	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++Cg + + ++ L rH+ H Kalax.0286s0037.2.p 622 YRCNICGLRLKIQERLDRHMEWH 644 9*******************988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50157	9.723	622	649	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	624	644	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 778 aa Download sequence Send to blast
MRHLFRTWEG VFPLQPLQMI EKELGISLAV NGYGSVSARS KPESQSQYPQ KSIHINPKYL 60 EARQNHQPLS RAKGPTTDIS GNVMKSTGNV ARLGTQHREP QRESMYEKDT EAIYGDYDFS 120 LKKSGVDEHD KHWYGTDTNT AETVMGQQNG YDRKQKLTNY STPQSHATRN NDGMSRSWKS 180 NEEEEYLWDD IGSRVINHSA PGDPRKDSRV FDDPEDMEST DGMSYPAATT HHSTQSPDYA 240 RVLGVASAGA SSSVVRKALQ SQMIRPLATG AVAKSQTNIN ATIGQKSTAA QSRQPVLHRR 300 SSSPSLSAGH DNSAPRNLAD VDFPSSNSAQ RAALKSSQIS EQDNVRSRPQ LKRESSTMLP 360 QSRKKPLLES QKSKLTPSSA PLSQQRMQKR SLPQHSRSDG RPSEPSVQNL KLPASAAPTK 420 RVSNPKPDVD SKDMPDCVHS DIHSPVSGGV ACGEVGSKAP KMSAAPITTS SQVNKSATSV 480 SKMISAPCQT STSKAMSKKA GEENNVAANP FSNLLSTLME KGLITSSKNE SSTLLVSDEF 540 QDAIPGVVST SLPATKVLTS SSHASLFGGN NALALEHATY TSVDNPSNAS EIKNLIGFEF 600 KPNLIRQLHE PVIEDLLDDL PYRCNICGLR LKIQERLDRH MEWHSSKEID NEYGASRTWY 660 SDMDDWIAGK LVIAVEPVYS TEENEEAVIE DEGCLVTADE SQCICILCGE LFEDYYNQEE 720 DEWMFRGAMS VKVSDTRYEN ITSNNGPAQD LIVHLECFTE SSARELGLVA KVKEEES*

Sequence ? help Back to Top

Protein Sequence Length: 778 aa Download sequence Send to blast

MRHLFRTWEG VFPLQPLQMI EKELGISLAV NGYGSVSARS KPESQSQYPQ KSIHINPKYL  60
EARQNHQPLS RAKGPTTDIS GNVMKSTGNV ARLGTQHREP QRESMYEKDT EAIYGDYDFS  120
LKKSGVDEHD KHWYGTDTNT AETVMGQQNG YDRKQKLTNY STPQSHATRN NDGMSRSWKS  180
NEEEEYLWDD IGSRVINHSA PGDPRKDSRV FDDPEDMEST DGMSYPAATT HHSTQSPDYA  240
RVLGVASAGA SSSVVRKALQ SQMIRPLATG AVAKSQTNIN ATIGQKSTAA QSRQPVLHRR  300
SSSPSLSAGH DNSAPRNLAD VDFPSSNSAQ RAALKSSQIS EQDNVRSRPQ LKRESSTMLP  360
QSRKKPLLES QKSKLTPSSA PLSQQRMQKR SLPQHSRSDG RPSEPSVQNL KLPASAAPTK  420
RVSNPKPDVD SKDMPDCVHS DIHSPVSGGV ACGEVGSKAP KMSAAPITTS SQVNKSATSV  480
SKMISAPCQT STSKAMSKKA GEENNVAANP FSNLLSTLME KGLITSSKNE SSTLLVSDEF  540
QDAIPGVVST SLPATKVLTS SSHASLFGGN NALALEHATY TSVDNPSNAS EIKNLIGFEF  600
KPNLIRQLHE PVIEDLLDDL PYRCNICGLR LKIQERLDRH MEWHSSKEID NEYGASRTWY  660
SDMDDWIAGK LVIAVEPVYS TEENEEAVIE DEGCLVTADE SQCICILCGE LFEDYYNQEE  720
DEWMFRGAMS VKVSDTRYEN ITSNNGPAQD LIVHLECFTE SSARELGLVA KVKEEES*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Link Out ? help Back to Top
Phytozome	Kalax.0286s0037.2.p