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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Kalax.0295s0004.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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| Family |
BBR-BPC |
| Protein Properties |
Length: 301aa MW: 33861 Da PI: 10.0564 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Kalax.0295s0004.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 326.2 | 9.7e-100 | 1 | 300 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.maflqrdkalaernkalverdnkllall 85
mddd rn+gyyep+ +k +l+lqlm s+aerd+k+ r+ l + +++a++++ +++q ++ + ++ + + + +++
Kalax.0295s0004.1.p 1 MDDDDGF-RNWGYYEPS--FKGHLNLQLMPSVAERDTKPflpgRDPTLMINPNRGAYQHHPpHHHHQLNHHAHPHHTQEFDVSDSPMHMH 87
6666443.9******99..************************88888666666777666544455666666666666677777778888 PP
GAGA_bind 86 lvenslasalpvgvqvlsgtksidslqq..lse.pqledsa.velreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkks 171
+++++ +++ + +++l+g s + + ++ ++ +++ ++++e+ +e+ ++ + e +kkr + pk +k kk+kk +
Kalax.0295s0004.1.p 88 YMRETWMHQRDKFMNILPGNPSFGIMPEppATQpLHMMEQPvMPKTEMV----VRMEDPVPLKVEG-PTKKRPGGGAPKIPKIKKPKKGP 172
8888777888888888888888877777322223233333303333333....3333444444443.3444778899***********99 PP
GAGA_bind 172 ekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmS 261
+ +k++ + +s +r+k +kk++d+v+ngv++D+s++P+PvC+CtGa++qCY+WG+GGWqSaCCtt+iSvyPLP+stkrrgaRiagrKmS
Kalax.0295s0004.1.p 173 SLPKENGNGSS--QRVKPPKKNVDVVINGVDMDISNIPIPVCTCTGASQQCYRWGCGGWQSACCTTSISVYPLPMSTKRRGARIAGRKMS 260
99988887777..89*************************************************************************** PP
GAGA_bind 262 qgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
gafkk+LekLa+eGy++ +p+DLk+hWAkHGtnkfvtir
Kalax.0295s0004.1.p 261 LGAFKKVLEKLASEGYNFTHPIDLKSHWAKHGTNKFVTIR 300
***************************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009723 | Biological Process | response to ethylene |
| GO:0050793 | Biological Process | regulation of developmental process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MDDDDGFRNW GYYEPSFKGH LNLQLMPSVA ERDTKPFLPG RDPTLMINPN RGAYQHHPPH 60
HHHQLNHHAH PHHTQEFDVS DSPMHMHYMR ETWMHQRDKF MNILPGNPSF GIMPEPPATQ 120
PLHMMEQPVM PKTEMVVRME DPVPLKVEGP TKKRPGGGAP KIPKIKKPKK GPSLPKENGN 180
GSSQRVKPPK KNVDVVINGV DMDISNIPIP VCTCTGASQQ CYRWGCGGWQ SACCTTSISV 240
YPLPMSTKRR GARIAGRKMS LGAFKKVLEK LASEGYNFTH PIDLKSHWAK HGTNKFVTIR 300
*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269|PubMed:14731261, ECO:0000269|PubMed:15722463}. |
