PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0316s0044.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 143aa    MW: 16059.2 Da    PI: 9.5199
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0316s0044.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.3e-142479560
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
                         ++ +r+ +NRe+ArrsR++K+++++ L+  v +L++eN+++ +++   +  ++++ 
  Kalax.0316s0044.1.p 24 RKRKRMLSNRESARRSRLKKLKQMDDLTGQVSQLKSENDQMMQRIAATERSYEYVA 79
                         678999**************************************999988888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-131777No hitNo description
SMARTSM003382.9E-182084IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.7142278IPR004827Basic-leucine zipper domain
PfamPF001704.9E-122477IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-122478No hitNo description
CDDcd147025.84E-162575No hitNo description
PROSITE patternPS0003602742IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MGTRNQAVSS GSDGSPQSGM PDERKRKRML SNRESARRSR LKKLKQMDDL TGQVSQLKSE  60
NDQMMQRIAA TERSYEYVAA EKDILRAEAM ALTNRLRSLN DFIYMAEQVN GLAMGIPESL  120
VEPWQLPYQA PQFTASANVF HC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12344RKRKRMLSNRESARRSRLKKLK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018808498.14e-41PREDICTED: bZIP transcription factor 53
TrEMBLA0A200PWI36e-41A0A200PWI3_9MAGN; Basic-leucine zipper domain
STRINGXP_009339775.13e-40(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.12e-37basic region/leucine zipper motif 53