PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0338s0028.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bZIP

Protein Properties

Length: 401aa MW: 44248.9 Da PI: 7.8112

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0338s0028.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.3	1.1e-15	200	252	3	55
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 + kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L eN +L k+l ++++ Kalax.0338s0028.1.p 200 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENCSLTKRLTDISQK 252 689*****************************************998877765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.1E-12	197	254	No hit	No description
SMART	SM00338	2.0E-16	198	262	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.369	200	254	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.1E-14	201	251	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.9E-11	202	251	No hit	No description
PROSITE pattern	PS00036	0	205	220	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	1.2E-33	269	396	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence Send to blast
MDRVFSMEGM VEQLWTPSQL DNVNASPSSK TKLNRSSSEW AFQLFIQENS TSDHSPAAKQ 60 EEHYDDDVVE IKDQRAAPLN LPIDSDEYQA FLKTRLDLAC AAVAMTRQAS IGKPQDSSTS 120 TDSGSKASQV HSQVNRKGST FESSKQKNRN EPLGNSSLQA KPGKSVVRVK STTRGSSREL 180 SDDDELEGDT EITGDIDHTD AKRVRRMLSN RESARRSRRR KQAHLTELET QVAQLRVENC 240 SLTKRLTDIS QKFNDAAVDN RVLKADVETL RAKVKMAEET VKRVTGQSPM FQTMSETSTF 300 SYDWNASDIS TDAAVPIQDD RTHHISQQHI LNPLAATDTL DPGVTHSLSN NPTTKNIHPN 360 TSAAVPIASS GNKIGRTSSM QRVASLEHLQ KRIRGNSSAN *

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence Send to blast

MDRVFSMEGM VEQLWTPSQL DNVNASPSSK TKLNRSSSEW AFQLFIQENS TSDHSPAAKQ  60
EEHYDDDVVE IKDQRAAPLN LPIDSDEYQA FLKTRLDLAC AAVAMTRQAS IGKPQDSSTS  120
TDSGSKASQV HSQVNRKGST FESSKQKNRN EPLGNSSLQA KPGKSVVRVK STTRGSSREL  180
SDDDELEGDT EITGDIDHTD AKRVRRMLSN RESARRSRRR KQAHLTELET QVAQLRVENC  240
SLTKRLTDIS QKFNDAAVDN RVLKADVETL RAKVKMAEET VKRVTGQSPM FQTMSETSTF  300
SYDWNASDIS TDAAVPIQDD RTHHISQQHI LNPLAATDTL DPGVTHSLSN NPTTKNIHPN  360
TSAAVPIASS GNKIGRTSSM QRVASLEHLQ KRIRGNSSAN *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	214	221	RRSRRRKQ
2	216	221	SRRRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009610430.1	1e-123	PREDICTED: light-inducible protein CPRF2
Swissprot	Q99090	1e-109	CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBL	A0A1S3YD35	1e-121	A0A1S3YD35_TOBAC; light-inducible protein CPRF2-like
TrEMBL	A0A1S4CER8	1e-121	A0A1S4CER8_TOBAC; light-inducible protein CPRF2-like
TrEMBL	A0A1U7XCW9	1e-121	A0A1U7XCW9_NICSY; light-inducible protein CPRF2-like
TrEMBL	Q93YM7	1e-121	Q93YM7_TOBAC; BZIP transcription factor
STRING	XP_009610430.1	1e-122	(Nicotiana tomentosiformis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	2e-66	bZIP family protein

Link Out ? help Back to Top
Phytozome	Kalax.0338s0028.1.p

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115]