PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0354s0043.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family EIL
Protein Properties Length: 430aa    MW: 49011.5 Da    PI: 7.5412
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0354s0043.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3356.16.9e-109223031289
                          XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                 EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 
                          +elkkrmwkd+++++r+k++  ++  d++      + +  +e + rkkm+raQD iLkYM+k+mevcn +GfvYgi+pe gkpv+g+sds
  Kalax.0354s0043.1.p  22 DELKKRMWKDRVRMQRMKQKWSKE--DEDG-----RPEVKQELSTRKKMARAQDLILKYMVKIMEVCNGKGFVYGIVPERGKPVTGSSDS 104
                          79*************888888774..3443.....2334589************************************************ PP

                          XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--H CS
                 EIN3  91 LraWWkekvefdrngpaaisky.qaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkel 179
                          Lr+WWkekv+f++n+pa i+++ q        + +l+ ++ s+ h l+elqDTtlgS+Lsalmqhc ppqrrfp+e+g++pPWWPtG e+
  Kalax.0354s0043.1.p 105 LREWWKEKVRFNQNAPASIVENgQ--------ALGLELDPVSSMHLLQELQDTTLGSMLSALMQHCVPPQRRFPMERGLAPPWWPTGVEA 186
                          ********************9922........3335567999************************************************ PP

                          HHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGH.HHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...X CS
                 EIN3 180 wwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmspti.eeirelerqskylqdkmsakesfallsvlnqeekecatvsah...s 264
                          wwge+g  +++qg+ppy+kphdlkkawkvsvL+ vikhm+p+    +r+l+rqsk+lqdkm+a+e++++++v++qee++ +  +     s
  Kalax.0354s0043.1.p 187 WWGEQGvRAEEQGPPPYRKPHDLKKAWKVSVLATVIKHMQPDNlGLMRRLVRQSKRLQDKMTARETATWSKVVSQEEALTRMTKKClriS 276
                          ******6666777***************************9751679******************************9887655553222 PP

                          XXXXXXXXXXXXXXXXXXXXX..XXXX CS
                 EIN3 265 sslrkqspkvtlsceqkedve..gkke 289
                            + +++ ++++  +  e ++   +k 
  Kalax.0354s0043.1.p 277 TPTDDNDDDLQMGRNRPEKRQciFNKT 303
                          233334444444444444444443333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048734.9E-10722263No hitNo description
Gene3DG3DSA:1.10.3180.101.2E-63138269IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.88E-54140266IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    Send to blast
MVEILSELDP VVGSDNDDIS YDELKKRMWK DRVRMQRMKQ KWSKEDEDGR PEVKQELSTR  60
KKMARAQDLI LKYMVKIMEV CNGKGFVYGI VPERGKPVTG SSDSLREWWK EKVRFNQNAP  120
ASIVENGQAL GLELDPVSSM HLLQELQDTT LGSMLSALMQ HCVPPQRRFP MERGLAPPWW  180
PTGVEAWWGE QGVRAEEQGP PPYRKPHDLK KAWKVSVLAT VIKHMQPDNL GLMRRLVRQS  240
KRLQDKMTAR ETATWSKVVS QEEALTRMTK KCLRISTPTD DNDDDLQMGR NRPEKRQCIF  300
NKTAAVSYIS NSDPRQLGTS DRQSLNAPPA SLTDWAEMEP SEGNQESQYL QIKGQSNMKT  360
GSNDNSTIED VYRAHWRGQL TPEFGADSSF RFNKGPEMDL NSGPTTHELL LQGGASFWDS  420
VYMSSLYDQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-561382671128Protein ETHYLENE INSENSITIVE 3
4zds_B1e-561382671128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027337569.11e-135putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-116EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A2G9IAH01e-134A0A2G9IAH0_9LAMI; Uncharacterized protein
STRINGXP_007159632.11e-131(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-118EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]