PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0368s0037.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 348aa    MW: 38527.3 Da    PI: 7.941
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0368s0037.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.99.8e-10184231455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                          +h+ +Er RR+ri +++  L+ l+P +     +K   Ka iL + ++Y++sLq
  Kalax.0368s0037.1.p 184 SHSLAERVRRERISERMKMLQALVPGC-----EKvTGKALILDEIINYVQSLQ 231
                          8*************************9.....6769****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.44E-16178246IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.24E-11178235No hitNo description
PROSITE profilePS5088815.561180230IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.3E-16180241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-7184231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-9186236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MAAYSYQPHH FLLSSTLLPN TPFDISGFVN EGNITSKNST TVAFSNNLVS AEFLPMEVFH  60
EGFSDAAGVY QSSCHDHSSK MHSAASSVDM EKQVEEMGEQ VTQKLTPCNG HEEKKKTRKG  120
SSLDSKLGKL QGGKAKKQKK SDNRQNVKEK KPKVDKKNQK QEGSEDAQKD YIHVRARRGQ  180
ATDSHSLAER VRRERISERM KMLQALVPGC EKVTGKALIL DEIINYVQSL QNQIEFLSMK  240
LGSFNPIYSN FVMDLDAAML RQETLTRLAA SQPSGSSQQC SPTAVNYNSS TTTFTTPTAV  300
GYHPLIEASL FLQQEAAENL TWDQLDTQTQ NLMNQFGGLA NAICSFQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015882267.12e-85transcription factor bHLH137 isoform X1
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.26e-47bHLH family protein