PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0380s0026.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 661aa    MW: 74240.5 Da    PI: 6.7076
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0380s0026.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM79.95.7e-25801973128
                  NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                          pG+ F Ptd+e++v+yL+kk+e+ +++  ++i++ d+y+++Pw+L   + ++++++++fF+k+  +       nra+k g W  t  d+ 
  Kalax.0380s0026.1.p  80 PGYSFCPTDQEIIVQYLRKKMEDPDFKS-SAIPDKDVYSFDPWELYdGEQTTSRENLFFFTKTVVR-----GFNRAAKGGHWIMTMPDRF 163
                          8************************999.88**************844444455677888877654.....589**************** PP

                  NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          ++  +g   g+++ + f kg++++  kt+W++ ey++
  Kalax.0380s0026.1.p 164 IKI-DGVWGGMRRQFEFIKGQEQS--KTNWTIYEYSV 197
                          **9.999***********988887..*********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PRINTSPR012172.4E-92133No hitNo description
PRINTSPR012172.4E-93354No hitNo description
PRINTSPR012172.4E-95470No hitNo description
SuperFamilySSF1019411.83E-3376215IPR003441NAC domain
PROSITE profilePS5100533.24478215IPR003441NAC domain
PfamPF023651.7E-1480197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 661 aa     Download sequence    Send to blast
MPSYAEVLMR GSARNQRRRN NAPPQPQPPP QPPPPPSPPP LPSPPPSPPP QPSPPPSPPP  60
PSPSPPPAPP GGQQEMQSDP GYSFCPTDQE IIVQYLRKKM EDPDFKSSAI PDKDVYSFDP  120
WELYDGEQTT SRENLFFFTK TVVRGFNRAA KGGHWIMTMP DRFIKIDGVW GGMRRQFEFI  180
KGQEQSKTNW TIYEYSVPGN DSQAEGWVVC RVFEQQESSI NNEMGSSQSA GPPVSNNDCP  240
QQQGQQLPVN RSSTHSDART TVYSRNQQPV NMPATPPGPA HTASSMASIT PYNYNMVNPQ  300
LRAGPNVWMP EWPPNSNFLQ PDIGSVASLD PWFYDQDQHQ LNTPTTLQQR GWNPDQQQHF  360
NMAARRGQNQ PDYRSMTDSD GRRSYVPNQQ GQPQPVNRSS THSDAPTVDS HNQLPVNTPT  420
TQQGPPDPTA PYSYNMVNQQ LPGPNMRTFN PNFMHPGSAS STDPWFYNHN QRQWDAPTTL  480
QGPNQPGYTS WTHSDEQQRG WNPAQQQQFN MAARQGQNQP DYRSMTDSDG RTFYNPNQQN  540
PTMPAQQGLL YPYGPAHPAS NMISTYYYNM GNQQQPRIIT PPYHYNMGNQ QQPGIRPPRY  600
LRNVSMYPDT RVVGVGGNFN SYFPRPDAGS RGPHIRNDNQ SSVLPQGRDS DIIWADSITD  660
*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-198021919169NO APICAL MERISTEM PROTEIN
1ut4_B1e-198021919169NO APICAL MERISTEM PROTEIN
1ut7_A1e-198021919169NO APICAL MERISTEM PROTEIN
1ut7_B1e-198021919169NO APICAL MERISTEM PROTEIN
4dul_A1e-198021919169NAC domain-containing protein 19
4dul_B1e-198021919169NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-23NAC domain containing protein 58