PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0385s0016.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 555aa    MW: 59289.5 Da    PI: 8.1934
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0385s0016.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.41.2e-11423482463
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                           kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +a l+s +
  Kalax.0385s0016.1.p 423 PKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSAGLTSLN 482
                          59************************************************9999998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.4E-18420484IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.909422485IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-11424475No hitNo description
PfamPF001708.9E-10424481IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-11424480No hitNo description
CDDcd147032.37E-25425476No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    Send to blast
MGDTEEAHMD MMHRIQSSFG TSSSALPRQH SPSDVPHLSP AHMRAPMRHF GSFGAESGKR  60
VGIPPSHPHQ IPPVSPYSLI PVSRPPGQQP GAHAHAHAQG KSHSSHSRSL SQPALFSFDS  120
LPPLSPSPYR DSSSGSSHGH QVSGDVNMED REASPHLLLP PSPYGGSTNR LGEGLPPRKA  180
HRRSNSDITF GFNPLQSPIA PLRGPNTLER STSGGDKFGG SNSTPIQLVK REFSWNGGEG  240
TGERKLEGEV IDDLFSAYLN LDNIDTLNSS EADEKNGFGS REDLVSGASG TNTVGSSDNE  300
AESSAIGNNG NNDSAMSKLA LSGGVAQKKE GMKRSAAGDI APTTRHYRSV SMDSFMGGMH  360
FGDESPKLSP SPSPAPGQLS PGSSLDKNSN SFSLDFGNGE FSGAELKKIM ANDKLAEIAA  420
ADPKRAKRIL ANRQSAARSK ERKMRYISEL EHKVQTLQTE ATTLSAQLTL LQRDSAGLTS  480
LNNELKFRLQ AMEQQAQLRD ALNEALSAEV QRLKITSQEL RGETPSSSKG VSAPQHSLNQ  540
QMSQKSQNVT TKNQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023883422.10.0transcription factor RF2a
TrEMBLA0A2R6RBR60.0A0A2R6RBR6_ACTCH; Transcription factor RF2a like
STRINGVIT_03s0038g00860.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-116bZIP family protein