PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0387s0021.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 272aa    MW: 30266.1 Da    PI: 6.3107
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0387s0021.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.72e-102291271
             trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71
                         Wt    l+L++    +e +  ++ +  ++W+ +s+++++  ++r+  qC+ kw++l  +y +ik++e+++
  Kalax.0387s0021.1.p 22 WTLTDSLTLVNEIAAVEAECLDALSYYQKWKIISDNCAALEVNRTLDQCRRKWDSLFAEYDRIKRWEGGG 91
                         788888888888888888888888999****************************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.5042278IPR017877Myb-like domain
PfamPF138372.1E-84592No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MPPKKKEESA SRRTRSQVAP GWTLTDSLTL VNEIAAVEAE CLDALSYYQK WKIISDNCAA  60
LEVNRTLDQC RRKWDSLFAE YDRIKRWEGG GDAYWGLARE RRRAVGLPED FDRDLFNAVD  120
VVVKAQVERA SSRPDAVLED ADADPLGVIS PPVFKKQSHQ LTPQKRQVEV KKEKKIADDR  180
QTGSADVMAT QPGEKDGSVE VTASQLREKA ELIQAILEGK LAENKDYTLG DLKQGPSSHI  240
NLARRQGDKL IDCFGVIAST LDQLCKATHT Q*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.11e-55sequence-specific DNA binding transcription factors