PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0387s0049.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Nin-like

Protein Properties

Length: 374aa MW: 41368.7 Da PI: 6.2245

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0387s0049.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	79.4	3.9e-25	278	327	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++++l+dl yF+lpi+ AA eLgvc+Tv+K+iCR++G+ RWPhRkiksl Kalax.0387s0049.1.p 278 SRMTLHDLIDYFHLPIERAAVELGVCTTVVKKICRKHGLGRWPHRKIKSL 327 689*********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	18.019	267	347	IPR003035	RWP-RK domain
Pfam	PF02042	7.0E-23	280	327	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence Send to blast
MTDPKAVVPY HDPHDADIAV LSGNLLLDFS GEFTPTMDEL LNPAPVASHS DIDFSVLNPS 60 NDPYVQEILN DFIDNPIGDS APDASVSGQI DIVQPDDFSY TEPGPPLMIH NAPFSCASCA 120 VLGEMIHTDG NEVSKVEIHG LLGLVDHAVL QLFRRPHSPP TCELVDFCHM DPESVKQSLE 180 AYCADRRLAG FVLTEAPSSA SHSNRDAHQN TQAQQHPVHN VAGRFRVEPL QQQQRQKGYL 240 NAAIVSKTTL ALQTLILNDF ALIGYLAENE GMQRERSSRM TLHDLIDYFH LPIERAAVEL 300 GVCTTVVKKI CRKHGLGRWP HRKIKSLKRQ LEALNHNLRN ASNGRDRARI QRDIDRAAQQ 360 IDSIRKEAAA GRL*

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence Send to blast

MTDPKAVVPY HDPHDADIAV LSGNLLLDFS GEFTPTMDEL LNPAPVASHS DIDFSVLNPS  60
NDPYVQEILN DFIDNPIGDS APDASVSGQI DIVQPDDFSY TEPGPPLMIH NAPFSCASCA  120
VLGEMIHTDG NEVSKVEIHG LLGLVDHAVL QLFRRPHSPP TCELVDFCHM DPESVKQSLE  180
AYCADRRLAG FVLTEAPSSA SHSNRDAHQN TQAQQHPVHN VAGRFRVEPL QQQQRQKGYL  240
NAAIVSKTTL ALQTLILNDF ALIGYLAENE GMQRERSSRM TLHDLIDYFH LPIERAAVEL  300
GVCTTVVKKI CRKHGLGRWP HRKIKSLKRQ LEALNHNLRN ASNGRDRARI QRDIDRAAQQ  360
IDSIRKEAAA GRL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-11	Nin-like family protein

Link Out ? help Back to Top
Phytozome	Kalax.0387s0049.1.p