PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0392s0023.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 549aa    MW: 59692.1 Da    PI: 7.5743
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0392s0023.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.81.5e-10423481563
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  ++  l+ e+a l s++
  Kalax.0392s0023.1.p 423 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQVTILQRESAGLSSQN 481
                          9**************************************************99999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.5E-18419483IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.185421484IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.62E-11423475No hitNo description
PfamPF001701.0E-9423481IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.5E-12423480No hitNo description
CDDcd147032.45E-24424475No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 549 aa     Download sequence    Send to blast
MGDAGKAGDE MMQGGQSSFG TVHSSMPKHN MSLNHQLELT HLNTSLNGAP MQHFGQGHGV  60
DYGKRAIVSP SHNGQIPPLS PYSHLPVSRT SVQSMGSQSF VRSPSHSRSL SQPQVFNLDL  120
LPPLSPSPFR DSPPTNPLSV DINMDDRDAS SHFLPPSSYA RTNGATRPGE SLPPRKAHRR  180
SNSDIPSGFS MVMQSSPPLL PLKSPTTVER PASDRENGAR TNQSISRTSW NKVIDNNGEV  240
TGERKSEGEV IDDLFNAYMN LDSIGVTKPA VNGEKKTNEH REDLDSRASG SKTNAEENSD  300
NEAESSINES GNGIVKAGTS GSGCTQKREG IKRSAIGDIA PTARHYRSIS MDSFMGNMHF  360
GEELPKLHPS PGPCSGEISP SNSLEKNSNT FSLEFGNGEF SGAELKKIMA NDKLAEIALA  420
DPKRAKRILA NRQSAARSKE RKMRYISELE HKVQTLQTEA TTLSAQVTIL QRESAGLSSQ  480
NNELKFRLQA MEQQAQLRDA LNEALSAEVQ RLKLATQELS NNVQMYQQQS SQYNTLQNGM  540
SSKHDSTN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012084427.10.0transcription factor RF2a
TrEMBLA0A2R6RBR60.0A0A2R6RBR6_ACTCH; Transcription factor RF2a like
STRINGVIT_03s0038g00860.t010.0(Vitis vinifera)
STRINGcassava4.1_004047m0.0(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-139bZIP family protein