PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0394s0042.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 345aa    MW: 37111.1 Da    PI: 5.7158
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0394s0042.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.61.8e-15203258358
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                          ++kr+rr+ +NRe+ArrsR+RK++ + eLe+ +++L  e ++L k+l+e ++++ +
  Kalax.0394s0042.1.p 203 DDKRARRMLSNRESARRSRRRKQEHMSELETQAAQLRVEHSSLLKNLNESNQKYTE 258
                          79**********************************************99998865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.2E-10201256No hitNo description
SMARTSM003386.6E-15201265IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.013203266IPR004827Basic-leucine zipper domain
PfamPF001702.0E-12204257IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-10205256No hitNo description
PROSITE patternPS000360208223IPR004827Basic-leucine zipper domain
PfamPF124984.7E-10272324IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MDPSLFPVDD VSVTDPVAWP TPAMNRSSSE WAFQRFLDDV LRPEDSDNRI TITSTNTNNS  60
SDEVVEIADP HRLTGSSSSA SAPTNPDDYH AALKRQLDLA CAAVALSRKA SASPEPASSG  120
TGTAVPRAAL PANGGSIATG APNSSSSTQV KDWGTVDFAV SNEKPKLPAV QVKSSTSGSS  180
RDQSEDDELD GEAETTENMG RTDDKRARRM LSNRESARRS RRRKQEHMSE LETQAAQLRV  240
EHSSLLKNLN ESNQKYTEAS VNLRVLKADV ETLRAKVMMA EEKVKRLTGV NTLQHFPDVP  300
LVSMPFNGNL LTSIPSSMLP GTNHLSNLPT VAPTYKSSAP NLGP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1217224RRSRRRKQ
2219224SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A200RDQ53e-61A0A200RDQ5_9MAGN; Basic-leucine zipper domain
STRINGMigut.N01912.1.p7e-61(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.23e-39bZIP family protein