PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0398s0011.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 175aa    MW: 18470.4 Da    PI: 9.822
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0398s0011.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.17e-162473154
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
                         +++kG+r++k +g+Wv+eIr+p     +  r +lg++ tae Aa+a++ a  +l+
  Kalax.0398s0011.1.p 24 KKFKGIRRRK-WGKWVSEIRVPG----TpNRLWLGSYSTAEAAAAAHDVASFYLR 73
                         59*****998.**********82....589******************9998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.00E-162478No hitNo description
PROSITE profilePS5103218.7032582IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-152577IPR016177DNA-binding domain
PfamPF008476.4E-92573IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.4E-222575IPR001471AP2/ERF domain
SMARTSM003802.4E-242588IPR001471AP2/ERF domain
PRINTSPR003672.3E-82637IPR001471AP2/ERF domain
PRINTSPR003672.3E-84864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MSNSSSSGGG GSEQQSKLLM SKQKKFKGIR RRKWGKWVSE IRVPGTPNRL WLGSYSTAEA  60
AAAAHDVASF YLRSSTTVEG LKEGSDGVMS LSPRSVQKAA SDAGMAVDAA HRVVLMQQSG  120
GNGTSNNNGS HSRDIPVDSG REENWSFGGS WMVGDNNGGK CKPGDLNISV DDYL*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021813065.11e-37ethylene-responsive transcription factor ERF020-like
TrEMBLA0A314Y2K11e-36A0A314Y2K1_PRUYE; Ethylene-responsive transcription factor ERF020
STRINGEMJ278941e-36(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.11e-19ERF family protein