PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0412s0009.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family CPP
Protein Properties Length: 531aa    MW: 57847.7 Da    PI: 5.543
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0412s0009.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR50.34.7e-16437475240
                  TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                          ++k+CnCkkskClk+YCeCfaag++C  +C C++C+Nk 
  Kalax.0412s0009.2.p 437 SCKRCNCKKSKCLKLYCECFAAGVYCIGTCACQNCFNKP 475
                          689**********************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011143.3E-16436477IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163419.731437530IPR005172CRC domain
PfamPF036381.7E-11439474IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    Send to blast
MMDTPERNQI GSSLSRYEDS PVFNYLSNLS PIKPTKSAPI NQTFTSLNFS SLPSIFTSPH  60
VSSHKESRFL RSTPDKSQSE FSYIDACSNK ENEVIVDVNQ LHKYSSELHK ESVALDSLGG  120
APLEPRHEES DLPVELLQNL KANACHSITE DSSQSAEAAN SSVMIDQGPS SSGPALHKGP  180
IGWESLISDG ADLLMFDSPN MAKDLKALFK SPAVERVGTL LASQFLQDTP DFLKSDSTFL  240
VDACELQNEV HHHAESERID YAHDDFPNFM TDCMTSHSSE NMDDEPTTSL HRGVRRRCLV  300
FDTNGAQNFF LPDPSSSNPS MCMHDNKKGV TSKNADSSTL RILPGIGLHL NALATSGDHG  360
VQVSVSSCST SFQLPTTPQE SVHDVLTGAS LGKNVDPGMI QGSEDASLAS GLVSVDDINH  420
NSPIKKRCKP ESSGDESCKR CNCKKSKCLK LYCECFAAGV YCIGTCACQN CFNKPIHEDT  480
VLATRKQIES RNPLAFAPKV IRTSDPLPDV KVRKTKFECQ NLLCLEFGVS *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010649949.11e-123PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X1
RefseqXP_010649950.11e-123PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22780.16e-55Tesmin/TSO1-like CXC domain-containing protein