PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0423s0029.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

G2-like

Protein Properties

Length: 207aa MW: 23549.8 Da PI: 9.5135

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0423s0029.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	33	1.4e-10	1	20	36	55
G2-like 36 mkvkgLtlehvkSHLQkYRl 55 m+v+gLt++hvkSHLQkYR+ Kalax.0423s0029.1.p 1 MDVPGLTIYHVKSHLQKYRV 20 9******************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.4E-9	1	21	IPR009057	Homeodomain-like
Pfam	PF14379	9.6E-9	51	91	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence Send to blast
MDVPGLTIYH VKSHLQKYRV AKFVPESSNR GKYERRSISE MLPNFSATSA VQLNEALRLH 60 MEAERQLSHR MEASLKLKIE AQGRYMDRIT EDLRAGKTVA MKPAKPFNPI TSLPSLCDES 120 ESNSPKDQLS EPHLQSRALK RFRVEHDLVS APQMPDNYAP QYLTRPYDGQ SEMFNNQGLR 180 RVQYPVHDMS VPWNLTVSGP SPLMPN*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002264119.2	2e-55	PREDICTED: myb family transcription factor PHL7
TrEMBL	B9HCX3	3e-53	B9HCX3_POPTR; Uncharacterized protein
STRING	POPTR_0006s10190.1	4e-54	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.2	8e-28	G2-like family protein

Link Out ? help Back to Top
Phytozome	Kalax.0423s0029.1.p