PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0426s0024.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 408aa    MW: 44792.1 Da    PI: 5.6615
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0426s0024.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1315.6e-10266307546
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                          kr +r   NR +A+rsR RK  +i eLe+ v +L+ae + L 
  Kalax.0426s0024.1.p 266 KRVKRILANRQSAQRSRVRKMHYISELERSVTTLQAEVSILS 307
                          8999********************************987775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-12262326IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.128264311IPR004827Basic-leucine zipper domain
PfamPF001701.4E-8266306IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.6E-10266316No hitNo description
SuperFamilySSF579597.8E-11266319No hitNo description
CDDcd147031.44E-21267317No hitNo description
PROSITE patternPS000360269284IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MKTTEGGRTI MHIRLGLEHT DRSLLHTLKK TGQDAVILDF GGMAKLPPKI PNWPDFSNQK  60
FVSPYMSSLT PAGPESNPSW VDEFLYFSSS RRSNHRRAVS DSVSFFEPSS EPVLELECGG  120
GRHQRASTPP MQYANAACQD DNTEEYLHQF VKFDDDGEGE RLVSSMFNNE EVSLALGAPA  180
LPPLAALAVS NPSTPSDLGS VEDENNKLAN FPIGEATGNK LPKCEAYNEV DSSIKSESEG  240
QQTLSPATTG IATPATSESE RIVDPKRVKR ILANRQSAQR SRVRKMHYIS ELERSVTTLQ  300
AEVSILSPRV AFFDHQRLIL NVDNSALKQR IAALAQDKIF KDAHQEALKK EIERLRQVYE  360
HQQSLKNNMD KAAAGDTANA ASSSPAAPLS EPKACIENEE QQLMAAN*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021632854.15e-99basic leucine zipper 61-like isoform X2
SwissprotQ9M2K42e-83BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2C9UST61e-97A0A2C9UST6_MANES; Uncharacterized protein
STRINGcassava4.1_024267m1e-95(Manihot esculenta)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.16e-85bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]