PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0430s0002.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Trihelix
Protein Properties Length: 286aa    MW: 32646 Da    PI: 4.8624
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0430s0002.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.51.5e-1292176286
             trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          Wt + +  L++a  ++  + +r++l+   W++v++k+ +e ++er+ +qC+++++  +k+ykk+k+  +  + ++ss+  yf++++
  Kalax.0430s0002.1.p  92 WTVHGTFILLDAWGDRFLQRGRKSLRSEEWKKVAEKVsKESKIERTDTQCRNRLDTPKKKYKKEKAEFGV-SGGQSSKLIYFKKMD 176
                          99999********************************8999*************************9997.5888899******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.0E-1891177No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MYASDEYVYA RDEYVDACDE YMYGSDEYVY GSDEYVYAND EYVYTNDEYV YASRPITKRR  60
LDFASEFRIS PSFSPESSDS FFFSCEKKVA DWTVHGTFIL LDAWGDRFLQ RGRKSLRSEE  120
WKKVAEKVSK ESKIERTDTQ CRNRLDTPKK KYKKEKAEFG VSGGQSSKLI YFKKMDVLMS  180
PSPKQPGLSC GVDSRECVFS NPRVYLNRAN GLDEVRDSPG HSDSTEDDTY DSDGLPPRRK  240
RPGRANNPNN KNDCSSMTLL QMVEIAKIWQ GGDEDNSASA DNISS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021829161.18e-72trihelix transcription factor ASIL2-like
TrEMBLA0A2R6PSZ13e-72A0A2R6PSZ1_ACTCH; Trihelix transcription factor
STRINGEMJ184581e-72(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.14e-29Trihelix family protein