PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0491s0014.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BES1
Protein Properties Length: 311aa    MW: 33665.9 Da    PI: 8.9226
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0491s0014.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822208.42e-6481503149
               DUF822   3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92 
                          + r pt+kErEnnkrRERrRRai+ kiyaGLRaqGny+lpk++DnneVlkALc+eAGwvve+DGttyrkg+kp+   e+ g+sa++s +s
  Kalax.0491s0014.1.p   8 AARLPTAKERENNKRRERRRRAITGKIYAGLRAQGNYRLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGFKPP-PCEMNGNSANISACS 96 
                          5799**********************************************************************.9************** PP

               DUF822  93 slqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149
                          s+q+s++ss++asp++sy+asp+ss++psp++ld ++++    llp+l  l++v++s
  Kalax.0491s0014.1.p  97 SMQHSPQSSNFASPMPSYHASPTSSAIPSPTRLDVNPSS---YLLPFLWDLAAVPAS 150
                          ***********************************9885...788887777766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.7E-609131IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MTGSVSPAAR LPTAKERENN KRRERRRRAI TGKIYAGLRA QGNYRLPKHC DNNEVLKALC  60
AEAGWVVEED GTTYRKGFKP PPCEMNGNSA NISACSSMQH SPQSSNFASP MPSYHASPTS  120
SAIPSPTRLD VNPSSYLLPF LWDLAAVPAS LPPLRISNSA PVSPPVSSPT NKSQKRKPEW  180
MGFAKCPAKP DWMESLTKHP AFAASAPSSP SRKQCFTPTT IPECDESDVS TVDSGRWAAN  240
LTTAPSSPTF NLVQPVGQQG TTPRFGDGKF ARSSEFEFSS CRVKPWEGEI IHDMGMDDLE  300
LTLGTAKAHS *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-252990391452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-252990391452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-252990391452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-252990391452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012079081.11e-114BES1/BZR1 homolog protein 2
SwissprotQ94A437e-95BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A1Q3C9H31e-112A0A1Q3C9H3_CEPFO; DUF822 domain-containing protein
STRINGPOPTR_0005s12790.11e-112(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.61e-82BES1 family protein