PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0504s0006.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family FAR1
Protein Properties Length: 108aa    MW: 12021.9 Da    PI: 9.0271
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0504s0006.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.81.5e-073781247
                 FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                         fY++YA+  GF+ r    k+  ++g i+ +  +C+++gk+ +   +
  Kalax.0504s0006.1.p 37 FYKKYAHLSGFDARCGGDKRC-TDGLIKYKYIYCNRQGKHIKGVID 81
                         9***************98887.88889999999*****98776555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.9E-53781IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    Send to blast
MMYILPAGIM FDTSKCPENV ISIVGMCFNS IDERVPFYKK YAHLSGFDAR CGGDKRCTDG  60
LIKYKYIYCN RQGKHIKGVI DTLDNSSGKL KPRRTTNEAV DAKQCGN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-