PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0505s0016.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 447aa    MW: 50728.5 Da    PI: 8.6242
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0505s0016.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.45.7e-12155189539
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                          k  rr+++NReAAr+sR+RKka+i++Le+   +L 
  Kalax.0505s0016.1.p 155 KTLRRLAQNREAARKSRLRKKAYIQQLETSRIKLV 189
                          7789************************8555554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.9E-7151223IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.956153197IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-7155197No hitNo description
PfamPF001701.0E-8155193IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.5E-8156198No hitNo description
PROSITE patternPS000360158173IPR004827Basic-leucine zipper domain
PfamPF141441.4E-26246318IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MATSSSNKVA KNNSINNNST IHHHQLLQHH HHNLEHDARF QPSSASPMMT MMMQTRPPSS  60
PSSFHPNLIG NKEERHIEDE GRALFLYLHA LIPNGFADQS CASEMRPPTL NIFPSLPMHQ  120
DQTSTLKHEE NRQKLPRRLT SSSEQEGRLK IPDPKTLRRL AQNREAARKS RLRKKAYIQQ  180
LETSRIKLVQ LEQELHRSRS THGSSFSGGI VGEHPNLSMG LNLSSDAVVY DMEYGRWLEE  240
HHKLTCELRA AFVEQLHENE LSLYVNNWLA HFDQLIHLKS MVAKTDSFHL ISGAWKSPAE  300
RCFLWIGGFR PSQIIKIILK QIEPLSDNQL MGIYGLQNST QEGEEALSNG LESLSQSLSN  360
TIASDSLTSP PNDMSNYMGQ MAIAINKLST LEGFVRQADN LRQQTIHRLL QVLTVSQTAR  420
CFLTISEYFH SLRALSSLWL ARPRQE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027350993.11e-170bZIP transcription factor TGA10-like
SwissprotQ52MZ21e-159TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A2C9V7M51e-166A0A2C9V7M5_MANES; Uncharacterized protein
STRINGXP_009357109.11e-165(Pyrus x bretschneideri)
STRINGXP_009370244.11e-166(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.11e-133bZIP family protein