PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0506s0009.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 164aa    MW: 18476.9 Da    PI: 11.2666
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0506s0009.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.71.7e-10558356
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
                         ++k+ +r+++NRe+ArrsR RK++++ +    ++ ++  N++ + e+ + ++ +
  Kalax.0506s0009.1.p  5 DDKKRKRMESNRESARRSRIRKEQQLRQVISHIDLFKRRNSEIAYEMGQTQQRC 58
                         79***************************************9999998888777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.8E-8367IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.3E-7565No hitNo description
PROSITE profilePS502179.209557IPR004827Basic-leucine zipper domain
PfamPF001703.4E-8657IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-8762No hitNo description
CDDcd147022.78E-9858No hitNo description
PROSITE patternPS0003601025IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MAMADDKKRK RMESNRESAR RSRIRKEQQL RQVISHIDLF KRRNSEIAYE MGQTQQRCFA  60
VEAVMSHVAA HKAELELRLN HLLTMIQKAE SDMTARADTS VESPSFVSGN NGSRIRVPAF  120
VNGDHGVRGR WKNGSELDGH LSRSPWRSSP SPLTASATMS QTR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11926RRSRIRKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.12e-13basic region/leucine zipper motif 53