PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kalax.0537s0005.1.p

Organism

Kalanchoe marnieriana

Taxonomic ID

80907

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

G2-like

Protein Properties

Length: 189aa MW: 20581.6 Da PI: 8.6318

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kalax.0537s0005.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	65.4	1e-20	132	180	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 p+l+Wt++LH++F+ a++ L G ekA Pk+i e+m+v gLt+++v SHLQ Kalax.0537s0005.1.p 132 PKLVWTTQLHNKFLCALDIL-GLEKAQPKKIHEVMNVAGLTRANVVSHLQ 180 89****************.*************************** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50110	11.377	1	39	IPR001789	Signal transduction response regulator, receiver domain
Gene3D	G3DSA:3.40.50.2300	2.2E-4	1	42	No hit	No description
Gene3D	G3DSA:1.10.10.60	2.8E-19	130	180	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.63E-13	130	182	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.4E-18	131	181	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0000160	Biological Process	phosphorelay signal transduction system
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence Send to blast
MSADDKTHTL LRGLNGGAVL YMHKPVSTAE LKNIWQFIYR YSGKAIMNDH TEIFSEDVGG 60 SSCGSSTPGD PHFIAVSGAA TQLWKGNSNA AEDPLKMYNT RCVQHANGMQ IREAIVNNNA 120 PLPVVPRTGN NPKLVWTTQL HNKFLCALDI LGLEKAQPKK IHEVMNVAGL TRANVVSHLQ 180 VMCPYTIV*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1irz_A	6e-15	130	180	4	54	ARR10-B

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-24	response regulator 2

Link Out ? help Back to Top
Phytozome	Kalax.0537s0005.1.p