PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0541s0019.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 368aa    MW: 40433.4 Da    PI: 9.1094
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0541s0019.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.31.2e-062402851762
                          HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                          A+rsR RK+++i+eLe+ v++L+ e ++   ele  +++   l +e
  Kalax.0541s0019.1.p 240 AQRSRVRKLQYIAELERNVQALQVEGSEVSAELEFANQTNLILSME 285
                          89***********************999999998777766655555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0077229288IPR004827Basic-leucine zipper domain
CDDcd147033.10E-15232279No hitNo description
Gene3DG3DSA:1.20.5.1704.2E-5240295No hitNo description
SuperFamilySSF579595.19E-5240282No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MEKFEGSSNF KNLNHSGKTP LLPPKSPFPG GPTSFSGYSS SSGSGSRSFQ MHDDGTRHQR  60
TSSESVAIDD QPSWLADLLD EPDTPIRKGG HRRSSSDSFA YLDTGVASSS SFTAWDVYKF  120
KSLMSVSSWG NKEQNVYRDP GHGSFQGENN LSGRRGNHAR ASSLNSAARP ISISPGDKPL  180
SQNLGMSARG TDVPRTTIAG KQDARESGTN DKKAVDGWES YGPKPSASET DAKRAKQQFA  240
QRSRVRKLQY IAELERNVQA LQVEGSEVSA ELEFANQTNL ILSMENKALK QQLDSLAQEH  300
LIKYMEQEVL EREIGRLRNI YQQQPYLHQA AQPHPSSSHQ HNNSRDLDSQ LANLSLNKEA  360
NPSKAIL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024170155.11e-121uncharacterized protein At4g06598
TrEMBLA0A2P6PCW71e-119A0A2P6PCW7_ROSCH; Putative transcription factor bZIP family
STRINGXP_004299904.11e-120(Fragaria vesca)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.22e-68bZIP family protein