PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0580s0025.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family EIL
Protein Properties Length: 367aa    MW: 41516.1 Da    PI: 9.119
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0580s0025.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3320.93.3e-98222731266
                          XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                 EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 
                          +elkkrmwkd+++++r+k+++ ++ ed++      + +  +e + rkkm+raQD+iLkYM+k+mevcn +GfvYgi+pe gkpv+g+sds
  Kalax.0580s0025.1.p  22 DELKKRMWKDRVRMQRMKQKRSEE-EDEDG-----RPEVKQELSTRKKMARAQDSILKYMVKIMEVCNGKGFVYGIVPERGKPVTGSSDS 105
                          79*************999888873.34443.....344669************************************************* PP

                          XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--H CS
                 EIN3  91 LraWWkekvefdrngpaaisky.qaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkel 179
                          Lr+WWkekv+fd+n+paai+++ q        + +l+ ++ s  h l+elqDTtlgS+Ls+lmqhc ppqrrfp+e+g++pPWW tG   
  Kalax.0580s0025.1.p 106 LREWWKEKVRFDQNAPAAIVENgQ--------ALGLELDPVSRMHLLQELQDTTLGSMLSTLMQHCVPPQRRFPMERGLAPPWWLTG--- 184
                          ********************9922........3335567899*********************************************... PP

                          HHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGH.HHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.X CS
                 EIN3 180 wwgelglskdqgtppykkphdlkkawkvsvLtavikhmspti.eeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.s 266
                          w    g+  + g  +   phdlkkawkvsvL+avikhm+p+    +r+l+rqsk+lqdkm+a+e++++++v++qee++ +  +   + s
  Kalax.0580s0025.1.p 185 WRRGGGARGEGGGAGAASPHDLKKAWKVSVLAAVIKHMQPDNlGLMRRLVRQSKRLQDKMTARETATWSKVVSQEEALTRMTKKCLRiS 273
                          44434466666699*************************9751679******************************9886554443321 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048734.0E-9722260No hitNo description
Gene3DG3DSA:1.10.3180.105.9E-50139266IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167688.24E-43141263IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MVEIRSELDP VGGSDDNDIS YDELKKRMWK DRVRMQRMKQ KRSEEEDEDG RPEVKQELST  60
RKKMARAQDS ILKYMVKIME VCNGKGFVYG IVPERGKPVT GSSDSLREWW KEKVRFDQNA  120
PAAIVENGQA LGLELDPVSR MHLLQELQDT TLGSMLSTLM QHCVPPQRRF PMERGLAPPW  180
WLTGWRRGGG ARGEGGGAGA ASPHDLKKAW KVSVLAAVIK HMQPDNLGLM RRLVRQSKRL  240
QDKMTARETA TWSKVVSQEE ALTRMTKKCL RISTPTDDND DDLQMGRNRP EKRQCIFNRT  300
AAVSNIPNSG PRQLGTSDRQ SLNAPPASLT DWAEMEPSEG YQESQYLQIK GQSDMKTGSN  360
DNSTIED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A6e-481392641128Protein ETHYLENE INSENSITIVE 3
4zds_B6e-481392641128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021632559.11e-124putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ9LX161e-106EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A2C9US901e-123A0A2C9US90_MANES; Uncharacterized protein
STRINGGLYMA05G31410.11e-119(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-102EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]