PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0640s0004.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 198aa    MW: 22263.6 Da    PI: 8.8306
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0640s0004.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.24e-1471129462
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                           k+ +rk +NRe+ArrsR RK+  +eeL ++v +L++ +++Lk +l+  ++++ ++++e
  Kalax.0640s0004.1.p  71 QKNKKRKLSNRESARRSRIRKQNHMEELGDEVNQLKKLREQLKANLNFTRQLCMSVEAE 129
                          599********************************************999999988776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-1368132IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.17470117IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.3E-970121No hitNo description
SuperFamilySSF579592.04E-972125No hitNo description
PfamPF001704.3E-1072123IPR004827Basic-leucine zipper domain
CDDcd147022.93E-1674124No hitNo description
PROSITE patternPS0003607590IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MSPVISEILL SGLMINSSLL HRIHLVQSFS VLACLPKLYM ASPAGVSSLS STLLQHSGSE  60
EGVQQLMAVD QKNKKRKLSN RESARRSRIR KQNHMEELGD EVNQLKKLRE QLKANLNFTR  120
QLCMSVEAET AILETQMTEL RRRLGSLTGI INYTRSLNNS SIYEADAVYH QISDFESFFI  180
MDPGNHLISA CANIFMY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18491RRSRIRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.11e-24basic leucine-zipper 44