PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0674s0017.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 77aa    MW: 9264.89 Da    PI: 10.6736
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0674s0017.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind37.46.8e-1215473668
                         HHHHTHHHHSTT--HHHHHHHHHHTTEEE---S CS
         HSF_DNA-bind 36 fakkvLpkyFkhsnfaSFvRQLnmYgFkkvkde 68
                         f +++LpkyFk +nf+SFvRQLn+Y+ ++ + +
  Kalax.0674s0017.1.p 15 FGRDLLPKYFKRNNFSSFVRQLNTYQNTSKQLQ 47
                         77899********************86554443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467855.3E-81442IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004471.3E-81550IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene3DG3DSA:1.10.10.109.8E-101544IPR011991Winged helix-turn-helix DNA-binding domain
PRINTSPR000565.6E-51931IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000565.6E-53244IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 77 aa     Download sequence    Send to blast
MIKWNPLLYD AILWFGRDLL PKYFKRNNFS SFVRQLNTYQ NTSKQLQVTM DRLQEMELRK  60
QQLMPFFAKA VQSLVF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020528994.19e-20heat stress transcription factor A-1 isoform X2
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17750.14e-13heat shock factor 1