PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0707s0005.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 269aa    MW: 28949.2 Da    PI: 6.6291
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0707s0005.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.96.7e-1690142456
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                          ++r rr+ +NRe+ArrsR+RK+a+++ Le  v++L +eN +L k+l++  ++ 
  Kalax.0707s0005.2.p  90 VRRFRRMVSNRESARRSRKRKQAQLQDLESQVDQLRGENASLFKQLSSAAQQF 142
                          6899**************************************98877766654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.9E-1787151IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.389143IPR004827Basic-leucine zipper domain
PfamPF001701.4E-1390141IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.63E-1290141No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-1291143No hitNo description
CDDcd147021.36E-1992142No hitNo description
PROSITE patternPS00036094109IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MAWVVKEILS GLSSACGFPE NLLWSADIAP NQSNLTTTTT TATTIDSQSS LCAGSPPSEN  60
KPKDNPARAV ASGSDQSDYD DVEQNNPTDV RRFRRMVSNR ESARRSRKRK QAQLQDLESQ  120
VDQLRGENAS LFKQLSSAAQ QFKDAATNNR VLKSDVEALR AHVKLADEMV ARGSLTSSLN  180
HLLQTHLSLP LAMSSHGLNR LAGVSPTMTI PGEEASFTGN IPAAGQTATS LGQQHSLDHA  240
NNRIIDDVLS CVTDVWPPLE PHVPVVSK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103109RRSRKRK
2103110RRSRKRKQ
3105110SRKRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002283059.22e-78PREDICTED: basic leucine zipper 9
TrEMBLA0A3Q8TB533e-77A0A3Q8TB53_DIOKA; Transcription factor bZIP8
STRINGVIT_04s0008g02750.t017e-78(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.11e-59basic leucine zipper 9