PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0721s0012.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BES1
Protein Properties Length: 281aa    MW: 30171.7 Da    PI: 9.0435
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0721s0012.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822202.99.8e-6381473149
               DUF822   3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspes 92 
                          + r pt+kErEnnkrRERrRRai+ kiyaGLRaqGny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+      g+sa++s +s
  Kalax.0721s0012.1.p   8 AARLPTAKERENNKRRERRRRAITGKIYAGLRAQGNYRLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGFKPP----PHGNSANISACS 93 
                          5799**********************************************************************....899********* PP

               DUF822  93 slqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149
                          s+q+s++ss++asp++sy+asp+ss++psp+++d ++++    llp+l  l++v++s
  Kalax.0721s0012.1.p  94 SQQHSPQSSNFASPMPSYHASPTSSAIPSPTRTDVNPSS---YLLPFLWDLAAVPAS 147
                          **********************************99885...788887777766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056875.7E-589128IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MTGSVSPAAR LPTAKERENN KRRERRRRAI TGKIYAGLRA QGNYRLPKHC DNNEVLKALC  60
AEAGWIVEED GTTYRKGFKP PPHGNSANIS ACSSQQHSPQ SSNFASPMPS YHASPTSSAI  120
PSPTRTDVNP SSYLLPFLWD LAAVPASLPP LRVSNSAPVT PPVSSPTNKS QKPSSAPSSP  180
SRRQGFNPTT IPECDESDVS TVDSGRWAAN LTTAPSSPTF NLVQPVGQQG TTPRVGDGKF  240
ARSSEFEFSS CRVKPWEGEI IHEMGMDDLE LTLGTAKAHC *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A7e-242982391444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B7e-242982391444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C7e-242982391444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D7e-242982391444Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006383241.11e-102BES1/BZR1 homolog protein 2
RefseqXP_012079081.11e-103BES1/BZR1 homolog protein 2
SwissprotQ94A432e-89BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A1Q3C9H31e-106A0A1Q3C9H3_CEPFO; DUF822 domain-containing protein
STRINGPOPTR_0005s12790.11e-102(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50750.13e-55BES1/BZR1 homolog 1