PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0768s0006.2.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 329aa    MW: 36669.2 Da    PI: 8.4522
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0768s0006.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.2e-104383545
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                         k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Kalax.0768s0006.2.p 43 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 83
                         788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-839108IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4154185IPR004827Basic-leucine zipper domain
PfamPF001704.9E-74383IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.85E-74386No hitNo description
Gene3DG3DSA:1.20.5.1709.9E-84488No hitNo description
PROSITE patternPS0003604661IPR004827Basic-leucine zipper domain
PfamPF141441.0E-32125200IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
MADVSQGTDT STDVEEEKNQ GFGMVLSTGN SSDRSKDKPG DQKTLRRLAQ NREAARKSRL  60
RKKAYVQQLE SSRLKLTQLE QELQRARQQG IFISSSGDHA HSMSGNGALA FDAEYTRWLE  120
EHNKQINELR AAVSSHAGDT ELRTIVDNVT AHYDDIFRLK DTAAKADVFH ILSGMWKTPA  180
ERCFLWIGGF RSSELLKLLV NQLEPLTEQQ LVAIYNLQQS SQQAEDALSQ GMELLQQSLA  240
ETLASGSPSP SGNSGNVANY MGQMAMAMGK LGTLEGFLRQ ADNLRQQTLE RMHKILTTRQ  300
SARALLAIHD YFSRLRALSS LWLARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004303596.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X2
RefseqXP_011467318.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X3
RefseqXP_011467319.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X4
RefseqXP_011467322.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X7
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0D2PJG40.0A0A0D2PJG4_GOSRA; Uncharacterized protein
TrEMBLA0A0D2TRW40.0A0A0D2TRW4_GOSRA; Uncharacterized protein
STRINGXP_004303596.10.0(Fragaria vesca)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-150TGACG motif-binding factor 6