PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0790s0005.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 395aa    MW: 42151 Da    PI: 7.9914
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0790s0005.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_167.62e-21250312163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          e+ lk errkq+NRe+ArrsR+RK+ae+eeL+ kv++L aeN +Lk+ +++l k+++klk e+
  Kalax.0790s0005.1.p 250 ERHLKQERRKQSNRESARRSRLRKQAETEELAAKVDVLMAENVTLKSDISQLVKNSEKLKLEN 312
                          789*********************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.0E-29196IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1701.1E-13248309No hitNo description
PfamPF001706.8E-20250312IPR004827Basic-leucine zipper domain
SMARTSM003387.3E-17250314IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.128252315IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.63E-10253309No hitNo description
CDDcd147021.57E-18255301No hitNo description
PROSITE patternPS000360257272IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MGNNEESKRC KSDKSTSPAP QDLIGMHVHP PADWAAMQAF YGPRIPLPQY YNSAYPAGHP  60
PHPYMWGLPQ AMMPSFAAPY AAIYPPGGVY AHPGVPIGSP KLGLGALSTP SATDALAATA  120
LSIQTPGKTS GNTTGGSMDS ESGDCGGSSC GSGVKTSGDE QSLIKRKGER PRGIEKTEKL  180
EIQANSTVAV DTNVVPSMVA GVGVGPASNG KLENVTALDM KTNHVVNSNL SVDAQQSGSK  240
LSSETCFQSE RHLKQERRKQ SNRESARRSR LRKQAETEEL AAKVDVLMAE NVTLKSDISQ  300
LVKNSEKLKL ENARMMEKLK NAKFEKAERI GPNDTDDNRN QTRSTENLLS RVNNSGSAVT  360
QEEEGEMYSN NNSNPAKLHQ LMDASPRADA VAAS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1266272RRSRLRK
2266273RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018827913.11e-112PREDICTED: common plant regulatory factor 1-like isoform X2
TrEMBLA0A2I4F8E01e-111A0A2I4F8E0_JUGRE; common plant regulatory factor 1-like isoform X2
STRINGVIT_15s0046g01440.t011e-110(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.23e-52G-box binding factor 3