PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0800s0007.4.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 154aa    MW: 17889.3 Da    PI: 10.3614
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0800s0007.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.75.2e-124889351
                  AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                          +GV++  k+ +W A I++      +k+++lg+ gt eeAa ++++a+ 
  Kalax.0800s0007.4.p 48 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAAHLYDRAAY 89
                         79**98..47*********4.....5********************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.0E-64790IPR001471AP2/ERF domain
SMARTSM003803.8E-447104IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-84892IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.4E-75094IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MKDDFRPSLN HLSASSLTKE QPAPPISEFK RRKRHKRKQI QDQETCLMRG VYFKNMKWQA  60
AIKVDKKQIH LGTVGTQEEA AHLYDRAAYM CGREPNFELS EVEKQELKQL NWDEFLEITR  120
STITSKKHQR RGIVSSRRRS VLSSQHSSSM DGE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13038RRKRHKRKQ
23138RKRHKRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019161297.11e-63PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_019161301.11e-63PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_019161307.11e-63PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
SwissprotQ56XP95e-44ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A1D1YB752e-55A0A1D1YB75_9ARAE; Ethylene-responsive transcription factor-like protein At4g13040
STRINGcassava4.1_015296m8e-54(Manihot esculenta)
STRINGXP_009758059.11e-53(Nicotiana sylvestris)
STRINGGSMUA_Achr6P06510_0011e-53(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-45ERF family protein