PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0875s0005.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 310aa    MW: 33751 Da    PI: 4.7107
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0875s0005.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.47.2e-09138182246
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                          + +k+ +r  +N+ AA rsR+RKk+ ++ Le k+  Le+e ++L 
  Kalax.0875s0005.1.p 138 PNSKKRKRQLRNKDAALRSRERKKMHVKDLEVKSRYLEGECRRLG 182
                          5689************************************98775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.6E-11134199No hitNo description
SMARTSM003381.1E-4137201IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.484139196IPR004827Basic-leucine zipper domain
PfamPF001702.7E-7140193IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.5E-9141197No hitNo description
CDDcd147045.02E-14142193No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MSDAGIFDDG VDLEHVLDSD PELVKLLEDS LSSPVAEEST DSVPSWIGEI ENLLMNDDVA  60
VDAQLVDGVD PSYLDQFIAS FLLDAPADVA GDGELLSASD DKSPPPHVTD SKGASEKETE  120
ATQADANGDA DADDDNDPNS KKRKRQLRNK DAALRSRERK KMHVKDLEVK SRYLEGECRR  180
LGRLLQCCNV ENQDLRFRLH MGNGATGAAM TKQESAVLLL ESLLLGSLFW FLGIVWLFHP  240
PKLLNSNKEA VALPGIGKSD PRSARLRRVG SNIIQSLGLG TLVDSRTCRA LRTKMKPLHS  300
YTSSLSILA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_010061241.13e-55(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.12e-17basic region/leucine zipper motif 60