PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0898s0015.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WOX
Protein Properties Length: 119aa    MW: 13280.2 Da    PI: 10.091
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0898s0015.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox451.9e-143511457
                         HHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox 14 eLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                          Lee+++   r+psa ++ +++++l    +L+ ++V++WFqN++a++k+
  Kalax.0898s0015.1.p  3 LLEEVYKGgLRNPSAGQIHQITAHLssfgKLQGKNVFYWFQNHKARDKQ 51
                         69*****99**************************************97 PP
2Wus_type_Homeobox83.42.8e-272521464
    Wus_type_Homeobox 14 kiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                         ++Lee+yk Glr+P++ +i++ita+L+++Gk+++kNVfyWFQN+kaR++q+
  Kalax.0898s0015.1.p  2 TLLEEVYKGGLRNPSAGQIHQITAHLSSFGKLQGKNVFYWFQNHKARDKQR 52
                         78************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500719.556152IPR001356Homeobox domain
SuperFamilySSF466896.13E-8355IPR009057Homeodomain-like
PfamPF000463.7E-12351IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.5E-4451IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
VTLLEEVYKG GLRNPSAGQI HQITAHLSSF GKLQGKNVFY WFQNHKARDK QRLKKKKLLM  60
VKQHPQSCCY YASLSSQMPA TRQDHETPPG NYSAPPVCQG RQRLQTLDLF HGGCPGGD*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor which may be involved in developmental processes. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009618151.15e-24PREDICTED: WUSCHEL-related homeobox 3-like
RefseqXP_016464869.15e-24PREDICTED: WUSCHEL-related homeobox 3-like
RefseqXP_022033204.14e-24putative WUSCHEL-related homeobox 2
SwissprotA2XZR33e-24WOX2_ORYSI; Putative WUSCHEL-related homeobox 2
TrEMBLA0A2G2YGK95e-24A0A2G2YGK9_CAPAN; Uncharacterized protein
STRINGSolyc11g072790.1.12e-23(Solanum lycopersicum)
STRINGXP_009618151.12e-23(Nicotiana tomentosiformis)
STRINGTRIUR3_16981-P12e-23(Triticum urartu)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.13e-22WOX family protein