PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0926s0003.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family FAR1
Protein Properties Length: 113aa    MW: 13238.2 Da    PI: 10.7389
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0926s0003.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.27.5e-25793290
                 FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
                          Yn+YA++ GF++rk+  ++s++n+ei+k+++vC+k+g+++   ++  +++++r   r+gC ak+++ ++ + kw+v+k++ eHnH+l+
  Kalax.0926s0003.1.p  7 AYNHYASRRGFRIRKHFLTRSRHNDEIIKKEYVCNKKGFKNVVPQT-IDHKKRRRDVRIGCLAKMEIGQK-SRKWVVDKFSDEHNHPLT 93
                         5*****************************************9999.899999999************99.9***************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.1E-22793IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    Send to blast
MGESYDAYNH YASRRGFRIR KHFLTRSRHN DEIIKKEYVC NKKGFKNVVP QTIDHKKRRR  60
DVRIGCLAKM EIGQKSRKWV VDKFSDEHNH PLTSVQTQAL VQISQLNSVI NL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-16FAR1 family protein