PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0993s0002.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 90aa    MW: 10283.7 Da    PI: 7.5146
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0993s0002.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.72.5e-131491060
                         HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60
                         +++NRe+ArrsR RK++ ++eL     +  +eN +Lk+e+++l+k+va l+
  Kalax.0993s0002.1.p  1 MISNRESARRSRMRKQKHLDELYH--SQVVQENVKLKDEVSQLRKMVADLQ 49
                         689*******************86..7999*****************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd147022.50E-11149No hitNo description
SuperFamilySSF579595.81E-9147No hitNo description
SMARTSM003380.0051154IPR004827Basic-leucine zipper domain
PfamPF001708.7E-11149IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-10248No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MISNRESARR SRMRKQKHLD ELYHSQVVQE NVKLKDEVSQ LRKMVADLQI TSPETFLREL  60
REMPCITDNA GEASPKSNHS ISCSIDLLD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1815RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002530800.16e-26basic leucine zipper 43
TrEMBLB9SXT11e-24B9SXT1_RICCO; Ocs element-binding factor, putative
STRINGXP_002530800.12e-25(Ricinus communis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-17basic leucine-zipper 42