PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1036s0004.3.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 511aa    MW: 56830.8 Da    PI: 4.6572
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1036s0004.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.46.9e-15317359754
                          HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          + Er RRd++N+++ +L++l+P++     kK + a+i+e A+eYIk+L
  Kalax.1036s0004.3.p 317 ATERDRRDNLNNKYTTLKSLIPSP-----KKTDRASIVEDAIEYIKEL 359
                          78**********************.....9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.383310359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.44E-12312361No hitNo description
SuperFamilySSF474595.03E-15312375IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.0E-12316359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-12316365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-13317384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    Send to blast
MIQTGTCVAM YEETACFDPN PIADEGAIQV ISNDLVSIPP HGNMESSIAI PHFDFDENVK  60
FPADEFFYKS SSKEDSMVPS TNAVASSAFG TEFQQQMAYD VENCCYGTES NSLMQEAIHE  120
VNQALSYEQS NWVASGDYEV QDMCYSSENQ QQMLQDELVQ NGQGIYTSSS VLDVPHPSAP  180
DLLHLLHLPR SPSSASFLPN STISFVNASQ SSTNFQNGAG LMDAASSSAM FYDPLLHLNL  240
PPQPPIFKDL FQSLPHGFNL PVPMTGSLFA RMDEMERSRG LYHDVDGHLI DDGVLEFTAD  300
MPPQMVKGRN GKLKPFATER DRRDNLNNKY TTLKSLIPSP KKTDRASIVE DAIEYIKELT  360
RTINELKVLV EKKRRVKERM KMLKTEASPD PESSSDVKHN GELNEPLRSS WLQRKSKDTE  420
VDVRIIDDEL TVKLSQRKKA NCLLTMSKIL EELQLDLQHV SGGQVGDFYS FFCNTKIGET  480
SCVYAGGIAK RLIEGVERQQ AGLGTNNISF *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1371376KKRRVK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028113214.11e-139transcription factor bHLH91-like
RefseqXP_028113215.11e-139transcription factor bHLH91-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.16e-54bHLH family protein