PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.1150s0011.1.p
Organism
Kalanchoe marnieriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 543aa    MW: 59313.8 Da    PI: 6.7299
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.1150s0011.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.31.1e-10410468563
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          kr +r   NR +A rs +RK  +i eLe kv++L++  ++L  ++ +l+  +a+l+s++
  Kalax.1150s0011.1.p 410 KRVKRILANRQSAARSKERKMRYISELEHKVQALQSDTTTLSAQVTQLQRDSAALTSQN 468
                          8999****************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.3E-18406470IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.151408471IPR004827Basic-leucine zipper domain
PfamPF001701.8E-9410468IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.22E-11410466No hitNo description
Gene3DG3DSA:1.20.5.1705.8E-12410467No hitNo description
CDDcd147031.67E-22411462No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MGDTERASND AMQRLQSSFG ASSCLNLKQP LASSQQLDVN HMSISHSDAP VQHFAQHFGV  60
ESGKRVGMPP SHPCQFPPIS PYSQLPAARQ PPQALSFRNF GQGSSHTQSL SQPSFINLDS  120
LPPLSPSPYR ESSDQFSRDV TMGEKEAGSQ NVLASSSFMG VNYGFHAGES LPPRKTHRRS  180
NSDSSAFGFS AMMESSLSLR PLDGSIPAQH NRNFGVANPG LVKSEFLWNA DSYKNAEGMG  240
ERKSEGEVID ELFSTYMNLD SVETMNSSGS NDKLGNGHHE SHHGGDTSDN ETEGSINESG  300
NGIATQGASD VIVKKEGMKR SATQDIAPAT RHYRSVSMDS FMGNMNFAQD ALKLPPSPSP  360
RPLKLSPSTS LDSNSNTFSL EFGKGEFSGE ELKKIMANEK LAEMALVDPK RVKRILANRQ  420
SAARSKERKM RYISELEHKV QALQSDTTTL SAQVTQLQRD SAALTSQNNE LRFRLQAMEQ  480
QAKLRDALNE TLHGEVQRLK LTTQQLGLNP RSSKDPANSQ MLQIADPKQQ ENIPIAKEEV  540
TD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012084427.10.0transcription factor RF2a
TrEMBLA0A2R6RBR60.0A0A2R6RBR6_ACTCH; Transcription factor RF2a like
STRINGXP_009804619.10.0(Nicotiana sylvestris)
STRINGXP_009627336.10.0(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-130bZIP family protein